##################################################################
To generate solutions (E1, E2, I1, I2), run main_dde23

Hierarchy of the codes: 

main_dde23
	J
	
	rhs
		hill
	history
	rhs_heavi
		heavi
	


##################################################################
To generate bifurcation diagrams, you need to install Biftool.
You should also change the path for Biftool so that it matches where you install the package.
Run main_N_all to get the diagram for length.
Run main_wE_all to get the diagram for wE.
Run main_rhobulkK_all to get the diagram for \rho_{K,bulk}.
main_save_data_1par requires you to create folders first for the data to be saved. You need to change the path in it to your own path.

Hierarchy of the codes: 

main_N_all
	main_init
		biftool
		rhs
		sys_tau
	main_setup_first_fixed_pt
		J
		rhs_dde23
		history
		
	main_initialize_branch

	main_cont_branch

	main_plot_bf

	main_extract_freq_amp

	main_save_data_1par
###################################################################


To get time evolutions of I1, X, Y, run main_X

Hierarchy of the codes: 

main_X
	J
	rhs_X
		hill
	cal_delays_X
	history_X